Bouyer is a surname, and may refer to:
- Franck Bouyer (born 1974), French professional bicycle racer
- Jean G. Bouyer (1891-1926), French World War I flying ace
- Jules Bouyer (born 2002), French diver
- Louis Bouyer (1913-2004), French Lutheran minister and scholar
- Marcel Bouyer (1920–2000), French politician
- Mathieu Bouyer (born 1987), French professional football player
- Mitch Bouyer (1837-1876), interpreter and guide for General Custer
- Patricia Bouyer-Decitre (born 1976), French computer scientist
- Reynold Gideon Bouyer (1741-1826), archdeacon of Northumberland
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