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FBXW5

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Protein-coding gene in the species Homo sapiens

FBXW5
Identifiers
AliasesFBXW5, Fbw5, F-box and WD repeat domain containing 5
External IDsOMIM: 609072; MGI: 1354731; HomoloGene: 8496; GeneCards: FBXW5; OMA:FBXW5 - orthologs
Gene location (Human)
Chromosome 9 (human)
Chr.Chromosome 9 (human)
Chromosome 9 (human)Genomic location for FBXW5Genomic location for FBXW5
Band9q34.3Start136,940,435 bp
End136,944,738 bp
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)
Chromosome 2 (mouse)Genomic location for FBXW5Genomic location for FBXW5
Band2|2 A3Start25,390,762 bp
End25,395,483 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right testis

  • left testis

  • apex of heart

  • popliteal artery

  • tibial arteries

  • muscle of thigh

  • gastrocnemius muscle

  • granulocyte

  • right lobe of liver

  • right coronary artery
Top expressed in
  • spermatocyte

  • spermatid

  • seminiferous tubule

  • muscle of thigh

  • entorhinal cortex

  • superior frontal gyrus

  • primary visual cortex

  • saccule

  • perirhinal cortex

  • right kidney
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

54461

30839

Ensembl

ENSG00000159069

ENSMUSG00000015095

UniProt

Q969U6

Q9QXW2

RefSeq (mRNA)

NM_018998
NM_178225
NM_178226

NM_013908
NM_001356407
NM_001356408

RefSeq (protein)

NP_061871

NP_038936
NP_001343336
NP_001343337

Location (UCSC)Chr 9: 136.94 – 136.94 MbChr 2: 25.39 – 25.4 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

F-box/WD repeat-containing protein 5 is a protein that in humans is encoded by the FBXW5 gene.

This gene encodes a member of the F-box protein family, members of which are characterized by an approximately 40 amino acid motif, the F-box. The F-box proteins constitute one of the four subunits of ubiquitin protein ligase complex called SCFs (SKP1-cullin-F-box), which function in phosphorylation-dependent ubiquitination. The F-box proteins are divided into three classes: Fbws containing WD-40 domains, Fbls containing leucine-rich repeats, and Fbxs containing either different protein-protein interaction modules or no recognizable motifs. The protein encoded by this gene contains WD-40 domains, in addition to an F-box motif, so it belongs to the Fbw class. Alternatively spliced transcript variants encoding distinct isoforms have been identified for this gene, however, they were found to be nonsense-mediated Messenger RNA decay candidates, hence not represented. Well established targets of FBXW5 include TSC2 and SEC23B.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000159069Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000015095Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: FBXW5 F-box and WD repeat domain containing 5".
  6. Hu J, Zacharek S, He YJ, Lee H, Shumway S, Duronio RJ, et al. (April 2008). "WD40 protein FBW5 promotes ubiquitination of tumor suppressor TSC2 by DDB1-CUL4-ROC1 ligase". Genes & Development. 22 (7): 866–71. doi:10.1101/gad.1624008. PMC 2279197. PMID 18381890.
  7. Jeong YT, Simoneschi D, Keegan S, Melville D, Adler NS, Saraf A, et al. (December 2018). "The ULK1-FBXW5-SEC23B nexus controls autophagy". eLife. 7. doi:10.7554/eLife.42253. PMC 6351106. PMID 30596474.

Further reading

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